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Subject:	Glycans not recongnized in tleap
From:	Robin Singh <[log in to unmask]>
Reply To:	Users of GLYCAM & GLYCAM-Web <[log in to unmask]>
Date:	Wed, 19 Apr 2023 05:19:25 -0400
Content-Type:	text/plain
Parts/Attachments:	text/plain (11 lines)

Hello everyone,

I am working on a pdb file called 1gmo in tleap, it contains proteins and glycans and I am facing some issues while working with the glycan part. I loaded GLYCAM_06j-1 force field but the glycans (IDS and SGN) are not getting recognized. I am getting errors saying Unknown residue and the glycans does not have a type.

If anyone has any idea then kindly let me know how can I make the glycans recognized in tleap. 

Any kind of help is really appreciated.

Regards,
Robin

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